Xeva
Analysis of patient-derived xenograft (PDX) data
Bioconductor version: Release (3.20)
The Xeva package provides efficient and powerful functions for patient-drived xenograft (PDX) based pharmacogenomic data analysis. This package contains a set of functions to perform analysis of patient-derived xenograft data. This package was developed by the BHKLab, for further information please see our documentation.
Author: Arvind Mer [aut], Benjamin Haibe-Kains [aut, cre]
Maintainer: Benjamin Haibe-Kains <benjamin.haibe.kains at utoronto.ca>
citation("Xeva")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Xeva")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Xeva")
The Xeva User's Guide | R Script | |
Reference Manual | ||
NEWS | Text |
Details
biocViews | Classification, GeneExpression, Pharmacogenetics, Pharmacogenomics, Software |
Version | 1.22.0 |
In Bioconductor since | BioC 3.9 (R-3.6) (5.5 years) |
License | GPL-3 |
Depends | R (>= 3.6) |
Imports | methods, stats, utils, BBmisc, Biobase, grDevices, ggplot2, scales, ComplexHeatmap, parallel, doParallel, Rmisc, grid, nlme, PharmacoGx, downloader |
System Requirements | |
URL | |
Bug Reports | https://github.com/bhklab/Xeva/issues |
See More
Suggests | BiocStyle, knitr, rmarkdown |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | Xeva_1.22.0.tar.gz |
Windows Binary (x86_64) | Xeva_1.22.0.zip |
macOS Binary (x86_64) | Xeva_1.22.0.tgz |
macOS Binary (arm64) | Xeva_1.22.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/Xeva |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/Xeva |
Bioc Package Browser | https://code.bioconductor.org/browse/Xeva/ |
Package Short Url | https://bioconductor.org/packages/Xeva/ |
Package Downloads Report | Download Stats |