Rnits

R Normalization and Inference of Time Series data

Bioconductor version: Release (3.20)

R/Bioconductor package for normalization, curve registration and inference in time course gene expression data.

Author: Dipen P. Sangurdekar <dipen.sangurdekar at gmail.com>

Maintainer: Dipen P. Sangurdekar <dipen.sangurdekar at gmail.com>

Citation (from within R, enter citation("Rnits")):

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Rnits")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rnits")

R/Bioconductor package for normalization and differential expression inference in time series gene expression microarray data.	PDF	R Script
Reference Manual	PDF
NEWS	Text

biocViews	DifferentialExpression, GeneExpression, Microarray, Normalization, Software, TimeCourse
Version	1.40.0
In Bioconductor since	BioC 3.0 (R-3.1) (10 years)
License	GPL-3
Depends	R (>= 3.6.0), Biobase, ggplot2, limma, methods
Imports	affy, boot, impute, splines, graphics, qvalue, reshape2
System Requirements
URL

Suggests	BiocStyle, knitr, GEOquery, stringr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Follow Installation instructions to use this package in your R session.

Source Package	Rnits_1.40.0.tar.gz
Windows Binary (x86_64)	Rnits_1.40.0.zip
macOS Binary (x86_64)	Rnits_1.40.0.tgz
macOS Binary (arm64)	Rnits_1.40.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/Rnits
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Rnits
Bioc Package Browser	https://code.bioconductor.org/browse/Rnits/
Package Short Url	https://bioconductor.org/packages/Rnits/
Package Downloads Report	Download Stats