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geneLenDataBase

This is the development version of geneLenDataBase; for the stable release version, see geneLenDataBase.

Lengths of mRNA transcripts for a number of genomes


Bioconductor version: Development (3.20)

Length of mRNA transcripts for a number of genomes and gene ID formats, largely based on UCSC table browser. Data objects are provided as individual pieces of information to be retrieved and loaded. A variety of different gene identifiers and genomes is supported to ensure wide applicability.

Author: Matthew Young [aut], Nadia Davidson [aut], Federico Marini [ctb, cre]

Maintainer: Federico Marini <marinif at uni-mainz.de>

Citation (from within R, enter citation("geneLenDataBase")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("geneLenDataBase")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text

Details

biocViews ExperimentData, Genome
Version 1.41.2
License LGPL (>= 2)
Depends R (>= 2.11.0)
Imports utils, rtracklayer, GenomicFeatures, txdbmaker
System Requirements
URL https://github.com/federicomarini/geneLenDataBase
Bug Reports https://github.com/federicomarini/geneLenDataBase/issues
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package geneLenDataBase_1.41.2.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/geneLenDataBase
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/geneLenDataBase
Package Short Url https://bioconductor.org/packages/geneLenDataBase/
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