flowMeans

DOI: 10.18129/B9.bioc.flowMeans    

This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see flowMeans.

Non-parametric Flow Cytometry Data Gating

Bioconductor version: 3.7

Identifies cell populations in Flow Cytometry data using non-parametric clustering and segmented-regression-based change point detection. Note: R 2.11.0 or newer is required.

Author: Nima Aghaeepour

Maintainer: Nima Aghaeepour <naghaeep at gmail.com>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowMeans")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowMeans")

 

PDF	R Script	flowMeans: Non-parametric Flow Cytometry Data Gating
PDF		Reference Manual

Details

biocViews	CellBiology, Clustering, FlowCytometry, Software
Version	1.40.0
In Bioconductor since	BioC 2.6 (R-2.11) (8.5 years)
License	Artistic-2.0
Depends	R (>= 2.10.0)
Imports	Biobase, graphics, grDevices, methods, rrcov, stats, feature, flowCore
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	CONFESS, flowType
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	flowMeans_1.40.0.tar.gz
Windows Binary	flowMeans_1.40.0.zip
Mac OS X 10.11 (El Capitan)	flowMeans_1.40.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/flowMeans
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/flowMeans
Package Short Url	http://bioconductor.org/packages/flowMeans/
Package Downloads Report	Download Stats