- Home
- Bioconductor 3.5
- Software Packages
- flowClust
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowClust")
In most cases, you don't need to download the package archive at all.
flowClust
|
|
|
|
|
Clustering for Flow Cytometry
Bioconductor version: Release (3.5)
Robust model-based clustering using a t-mixture model with Box-Cox transformation. Note: users should have GSL installed. Windows users: 'consult the README file available in the inst directory of the source distribution for necessary configuration instructions'.
Author: Raphael Gottardo <raph at stat.ubc.ca>, Kenneth Lo <c.lo at stat.ubc.ca>, Greg Finak <gfinak at fhcrc.org>
Maintainer: Greg Finak <gfinak at fhcrc.org>, Mike Jiang <wjiang2 at fhcrc.org>
Citation (from within R,
enter citation("flowClust")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowClust")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowClust")
| R Script | flowClust package | |
| Reference Manual | ||
| Text | README | |
| Text | NEWS |
Details
| biocViews | Clustering, FlowCytometry, Software, Visualization |
| Version | 3.14.0 |
| In Bioconductor since | BioC 2.2 (R-2.7) (9.5 years) |
| License | Artistic-2.0 |
| Depends | R (>= 2.5.0) |
| Imports | BiocGenerics, MCMCpack, methods, Biobase, graph, RBGL, ellipse, flowViz, flowCore, clue, mnormt |
| LinkingTo | |
| Suggests | testthat, flowWorkspace, flowWorkspaceData |
| SystemRequirements | GNU make |
| Enhances | |
| URL | |
| Depends On Me | flowMerge, flowTrans |
| Imports Me | CONFESS, flowTrans, flowType, openCyto |
| Suggests Me | BiocGenerics |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | flowClust_3.14.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | flowClust_3.14.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/flowClust |
| Package Short Url | http://bioconductor.org/packages/flowClust/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
