To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("NetCRG")

In most cases, you don't need to download the package archive at all.

NetCRG

 

   

This is the development version of NetCRG; to use it, please install the devel version of Bioconductor.

NetCRG An R package for studying cooperative re-sponse genes from transcriptomics data

Bioconductor version: Development (3.4)

NetCRG is acronym of Network of Cooperation Response Gene.

Author: Isar Nassiri [aut, cre]

Maintainer: Isar Nassiri <isar_nassiri at urmc.rochester.edu>

Citation (from within R, enter citation("NetCRG")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("NetCRG")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("NetCRG")

 

HTML NetCRG: An R package for studying cooperative response genes from transcriptomics data
PDF   Reference Manual

Details

biocViews Regression, Software, StatisticalMethod
Version 0.99.1
License GPL-2
Depends R (>= 3.2.2), MASS, igraph, qpgraph, pvclust (>= 2.0-0), RedeR, bnlearn (>= 3.2.5), gRain (>= 1.2-5), ggplot2 (>= 2.1.0), gbm (>= 2.1.1), limma, DMwR (>= 0.4.1)
Imports
LinkingTo
Suggests knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source NetCRG_0.99.1.tar.gz
Windows Binary NetCRG_0.99.1.zip
Mac OS X 10.9 (Mavericks) NetCRG_0.99.1.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/NetCRG
Package Short Url http://bioconductor.org/packages/NetCRG/
Package Downloads Report Download Stats

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