To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("leeBamViews")

In most cases, you don't need to download the package archive at all.

leeBamViews

This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see leeBamViews.

leeBamViews -- multiple yeast RNAseq samples excerpted from Lee 2009

Bioconductor version: 3.1

data from PMID 19096707; prototype for managing multiple NGS samples

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("leeBamViews")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("leeBamViews")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("leeBamViews")

PDF	R Script	managing multiple NGS samples with bamViews
PDF		Reference Manual

biocViews	ExperimentData, RNASeqData, SNPData, Saccharomyces_cerevisiae_Data, SequencingData
Version	1.4.0
License	Artistic 2.0
Depends	R (>= 2.15.0), Biobase, Rsamtools(>= 0.1.50), BSgenome
Imports	GenomicRanges, GenomicAlignments, methods
LinkingTo
Suggests	GenomeGraphs, biomaRt, org.Sc.sgd.db, edgeR
SystemRequirements
Enhances	multicore
URL
Depends On Me
Imports Me
Suggests Me	EDASeq
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	leeBamViews_1.4.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Package Short Url	http://bioconductor.org/packages/leeBamViews/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: