To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RIPSeekerData")

In most cases, you don't need to download the package archive at all.

RIPSeekerData

   

This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see RIPSeekerData.

test data for RIPSeeker

Bioconductor version: 3.1

The RIP-seq data in BAM format are the test data for the package RIPSeeker. The data correspond to two RIP-seq experiments, namely PRC2 and CCNT1. Raw data from NCBI Gene Expression Omnibus under accession numbers GSE17064 for PRC2 and in-house for CCNT1.

Author: Yue Li

Maintainer: Alejandro Reyes <reyes at embl.de>

Citation (from within R, enter citation("RIPSeekerData")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RIPSeekerData")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RIPSeekerData")

 

PDF R Script RIP-seq datasets for testing RIPSeeker package
PDF   Reference Manual

Details

biocViews ExperimentData, GEO, Genome, RIPSeqData, SequencingData, StemCell
Version 1.4.0
License GPL-2
Depends RIPSeeker
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source RIPSeekerData_1.4.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/RIPSeekerData/
Package Downloads Report Download Stats

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