To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("KEGGdzPathwaysGEO")

In most cases, you don't need to download the package archive at all.

KEGGdzPathwaysGEO

   

This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see KEGGdzPathwaysGEO.

KEGG Disease Datasets from GEO

Bioconductor version: 3.1

This is a collection of 24 data sets for which the phenotype is a disease with a corresponding pathway in the KEGG database.This collection of datasets were used as gold standard in comparing gene set analysis methods by the PADOG package.

Author: Gaurav Bhatti, Adi L. Tarca

Maintainer: Gaurav Bhatti <gbhatti at med.wayne.edu>

Citation (from within R, enter citation("KEGGdzPathwaysGEO")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("KEGGdzPathwaysGEO")

Documentation

PDF   Reference Manual

Details

biocViews ExperimentData, GEO, MicroarrayData
Version 1.6.0
License GPL-2
Depends R (>= 2.13.0)
Imports Biobase, BiocGenerics
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me PADOG
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source KEGGdzPathwaysGEO_1.6.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/KEGGdzPathwaysGEO/
Package Downloads Report Download Stats

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