To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("COHCAPanno")

In most cases, you don't need to download the package archive at all.

COHCAPanno

This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see COHCAPanno.

Annotations for City of Hope CpG Island Analysis Pipeline

Bioconductor version: 3.1

Provides genomic location, nearby CpG island and nearby gene information for common Illumina methylation array platforms

Author: Charles Warden

Maintainer: Charles Warden <cwarden45 at gmail.com>

Citation (from within R, enter citation("COHCAPanno")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("COHCAPanno")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("COHCAPanno")

PDF	R Script	COHCAPanno Vignette
PDF		Reference Manual

biocViews	ArrayExpress, CpGIslandData, ExperimentData, GEO, Homo_sapiens_Data, MethylationArrayData, MicroarrayData
Version	1.4.0
License	GPL-3
Depends	R (>= 2.10)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me	COHCAP
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	COHCAPanno_1.4.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Package Short Url	http://bioconductor.org/packages/COHCAPanno/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: