## ----DmelSGIstyle, echo=FALSE, results="asis"---------------------------- BiocStyle::latex(bibstyle="apalike") ## ----DmelSGIopts,include=FALSE------------------------------------------- library(knitr) opts_chunk$set(concordance=TRUE, resize.width="0.5\\textwidth", fig.align='center', dev=c('pdf','png'), cache=TRUE, tidy = FALSE) ## ----DmelSGIinstallation,eval=FALSE-------------------------------------- ## source("http://bioconductor.org/biocLite.R") ## biocLite("DmelSGI") ## ----DmelSGIfunctions---------------------------------------------------- fpath <- function(d) { file.path(opts_knit$get("output.dir"), "result", d,"") }