To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("IdeoViz")

In most cases, you don't need to download the package archive at all.

IdeoViz

This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see IdeoViz.

Plots data (continuous/discrete) along chromosomal ideogram

Bioconductor version: 3.1

Plots data associated with arbitrary genomic intervals along chromosomal ideogram.

Author: Shraddha Pai <Shraddha.Pai at camh.ca>, Jingliang Ren

Maintainer: Shraddha Pai <Shraddha.Pai at camh.ca>

Citation (from within R, enter citation("IdeoViz")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("IdeoViz")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("IdeoViz")

PDF	R Script	IdeoViz: a package for plotting simple data along ideograms
PDF		Reference Manual
Text		NEWS

biocViews	Microarray, Software, Visualization
Version	1.2.0
In Bioconductor since	BioC 3.0 (R-3.1) (1.5 years)
License	GPL-2
Depends	Biobase, IRanges, GenomicRanges, RColorBrewer, rtracklayer, graphics, GenomeInfoDb
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	IdeoViz_1.2.0.tar.gz
Windows Binary	IdeoViz_1.2.0.zip
Mac OS X 10.6 (Snow Leopard)	IdeoViz_1.2.0.tgz
Mac OS X 10.9 (Mavericks)	IdeoViz_1.2.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/IdeoViz/tree/release-3.1
Package Short Url	http://bioconductor.org/packages/IdeoViz/
Package Downloads Report	Download Stats

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